Counterfactual Confounder Adjustment for Single-cell Differential Expression Analysis

UPDATE (Fri 16 Apr 2021 06:58:42 PDT): Use goseq instead of a customized script.

Gene ontology enrichment

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Using average 1,077 \(\pm\) 1,122 protein coding genes as a discovery set (FDR 20 %)

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FDR cutoff 1e-02 showing at most top 10

• pathoAD BP

• pathoAD MF

• pathoAD CC

• apoe.e4 BP

• apoe.e4 MF

• apoe.e4 CC

• msex BP

• msex MF

• msex CC

• cog BP

• cog MF

• cog CC