GWAS

Bayesian modelling of summary statistics data

TL;DR. We develop Bayesian machine learning methods that excavate a latent structure or underlying joint models of summary statistics data. What are summary statistics data? There is no clear boundary to define that data are made available at the summary or observation level.

Recipes for GWAS data conversion/extraction

Useful tools Download PLINK 1.9 from https://www.cog-genomics.org/plink2. Install bcftools from https://samtools.github.io/bcftools/ but for MAC OS X it is easier to install UNIX tools via homebrew. After having homebrew installed, just tap in by brew install bcftools.